Autorun Organizer

[mls]

Is there a way to eliminate the clutter created after applications are not enabled, preferably a way to eliminate them separately from Autorun Organizer?

[Chemtable Software]

If I understood you correctly, some applications can be disabled via the standard Task Manager -> Startup tab.
Some other like Scheduled Tasks can be disabled via the corresponding tool taskschd.msc.

[peterblaise]

I right-click items with a line through them, one at a time, and select [ Remove ].



Then this is much 'cleaner' to review:



Is this useful for your intentions?
.